Insertion junction: CLIP2.050549_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050549
Chromosome:chromosome 3
Location:4148540
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172900 (1 of 2) PF11371 - Protein of unknown function (DUF3172) (DUF3172) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGGGGTGTTGCGCTCACTTTGTGAGTGCTAGGGCTCGACCTGCCAGC
Internal bar code:ATTTTTCATCTACGGCCTCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1795
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTTGAACGGAGGAGCCCT
Suggested primer 2:GGCCAAAGGTTGCTGTCAAG