Insertion junction: CLIP2.050556_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050556
Chromosome:chromosome 6
Location:3716610
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278158 (1 of 2) IPR001283//IPR003882//IPR014044 - Cysteine-rich secretory protein, allergen V5/Tpx-1-related // Pistil-specific extensin-like protein // CAP domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGCGAGAACCTGGCGCTGGGACATCCCTCCATTGAGGCAGCCATTGAC
Internal bar code:TGGGCGCTTGGTCAACACATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:5510
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:108
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGGGATGTTGGTTGGATT
Suggested primer 2:TGGTGAGGGTATTCGGACCT