Insertion junction: CLIP2.050559_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.050559
Chromosome:chromosome 9
Location:6110595
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g413000 (1 of 100) IPR001810 - F-box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCGTTCACACTGAGTCCACACGCACAGGCCCACGCAGCACAGCACCC
Internal bar code:CATGATTATTAAGTTTTCGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:491
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGTCACACCATCACACG
Suggested primer 2:AGCTTACGTCAGGACAGTGC