Insertion junction: CLIP2.050560_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050560
Chromosome:chromosome 12
Location:3314795
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498800 (1 of 1) PTHR23176:SF0 - RHO GTPASE-ACTIVATING PROTEIN 68F CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAGCGCGAGGCGCGGGAGCGGGTGAGCACGACACCGGCGGCGGCGCG
Internal bar code:GTCCTAGACTTATGGTCGGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3448
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TACTTACCATCTGCCGCTGC
Suggested primer 2:TTCCAGCGACTCTGTCAACC