Insertion junction: CLIP2.050560_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050560
Chromosome:chromosome 12
Location:3314799
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498800 (1 of 1) PTHR23176:SF0 - RHO GTPASE-ACTIVATING PROTEIN 68F CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCGCAATGCGCGCCGCGTCCGCTGCCACCGCCGCCGCCTCGGCCGCG
Internal bar code:GTCCTAGACTTATGGTCGGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1926
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCAGCGACTCTGTCAACC
Suggested primer 2:TACTTACCATCTGCCGCTGC