Insertion junction: CLIP2.050562_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050562
Chromosome:chromosome 2
Location:5939457
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g117900 HEL11,MTR4 DEAD/DEAH box family ATP dependent helicase; (1 of 2) K12598 - ATP-dependent RNA helicase DOB1 (MTR4, SKIV2L2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAGCTGGAGCGTCCGCATGACCTTAGATGTGAGGAGCTCGTGTTCCC
Internal bar code:GGTACCAAGAGGGATTGGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2286
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATTACGATGGCATCCCG
Suggested primer 2:GTGTGTGTGTGTGTGTCTGC