Insertion junction: CLIP2.050563_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050563
Chromosome:chromosome 4
Location:2947342
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g224700 NRT1 (1 of 1) K14638 - solute carrier family 15 (peptide/histidine transporter), member 3/4 (SLC15A3_4, PHT); Nitrate transporter NRT1 family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACACACACACACACACACACACACACACACACACACACGCGGGCGC
Internal bar code:TATGGCGGCCGGCGCTGGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1010
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTAGTGCCCCCAATCCTT
Suggested primer 2:GTGCGTTTGTGGGTCCAATC