Insertion junction: CLIP2.050564_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050564
Chromosome:chromosome 17
Location:4111079
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728976 (1 of 1) IPR000104//IPR001254//IPR009003 - Antifreeze protein, type I // Serine proteases, trypsin domain // Peptidase S1, PA clan CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAGCAGCAGCAGCAGCAGCAGCGAGCAGTACCAACAGCGGCAGTGGC
Internal bar code:TGTTTTCGGTCTAGCTGAGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1661
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AGAACCACAATCCCCACGTC
Suggested primer 2:ATCCTGCTGTGGTGAATGCA