Insertion junction: CLIP2.050565_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050565
Chromosome:chromosome 1
Location:4641469
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032100 (1 of 1) K10570 - DNA excision repair protein ERCC-8 (ERCC8, CKN1, CSA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCGAAGACCTGTTGCACGGTTGTGGAAGGTCGGTAGCCAACTGGGGGG
Internal bar code:GATACTTCAGCGCGACGGAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2942
LEAP-Seq percent confirming:36.2319
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGCACGGGAGAAACAGTC
Suggested primer 2:CTTGGTCGGACTGTCCCTTC