Insertion junction: CLIP2.050569_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.050569
Chromosome:chromosome 17
Location:3676554
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725600 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATAGTCGCGGCGCTGGGAGACGCAGGGGCGCCGGGCGGGCGAGACGCAG
Internal bar code:TAAGTTGGCGAGGAATGCCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1299
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCCACCGTAATTGACA
Suggested primer 2:CAAGTAAGAGGGGCAGGTCG