Insertion junction: CLIP2.050570_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050570
Chromosome:chromosome 1
Location:6137962
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043600 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGACGGTTCTCTCCCTGTCTGGTAGGTCCTCTCGCGCCGCTGCAGTC
Internal bar code:TTCGGGGTATTGTAGTGTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4428
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCCCCATCATTGTCAGAC
Suggested primer 2:CTTGGTAGAGGAGGGGAGCT