Insertion junction: CLIP2.050575_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.050575
Chromosome:chromosome 1
Location:2303773
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g012850 KCN8 Voltage-gated potassium channel; (1 of 1) PTHR10217//PTHR10217:SF514 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGTCGTGGTGCGCATCACATTAATCCTCCTCCCCACATGGATAACTC
Internal bar code:TTTACGGAAACCGTTCGTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3336
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCTTCAGAGATGCCCTCG
Suggested primer 2:CATTCGCCGCAGTGATCAAG