Insertion junction: CLIP2.050579_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050579
Chromosome:chromosome 12
Location:7247149
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g558800 (1 of 2) IPR000104//IPR017923 - Antifreeze protein, type I // Transcription factor IIS, N-terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTGGCCTGCAGGCACGTGGTCGCGGTGTGGAAGGGGGTGCTCAGGGC
Internal bar code:TTACTTGTTAGCAGGGCTGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2005
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTCCCTACTACAGCTGCT
Suggested primer 2:GCTGTGTCGCTCAAGCTTTC