Insertion junction: CLIP2.050580_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050580
Chromosome:chromosome 9
Location:6583349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g416309 (1 of 13) PF05050 - Methyltransferase FkbM domain (Methyltransf_21) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCGACCCAGCAGTTCTGGCAGGGGCATACAACACGCTTCGGCGTCAC
Internal bar code:CGTATGGCCTAAGTCTTTCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4369
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGCCCCACACTTACTCT
Suggested primer 2:TATCCTCAGGTGGAAGGGGG