Insertion junction: CLIP2.050590_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.050590
Chromosome:chromosome 2
Location:4955556
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTCGGGATACCGTCGGACAAGTGTTCCCCGGTCACGGGAAAAGGGGCT
Internal bar code:ACCCCTGGGTTATGTCTGTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1000
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTCACGAGTGAACGGAG
Suggested primer 2:GCCTGGCAGTTCCTGAGATT