Insertion junction: CLIP2.050598_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050598
Chromosome:chromosome 12
Location:1677003
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486400 (1 of 1) PTHR22957//PTHR22957:SF26 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // PROTEIN TBC-3, ISOFORM B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCTCACCTCCGACACACGAGCGATAGGCAGGTCCGGCCCGTCCTCGCT
Internal bar code:GATGATGTTTGCTCTATGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1925
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CACAACGCAACACTGTCCTG
Suggested primer 2:GCTGTACCCGAACCAACTGA