Insertion junction: CLIP2.050604_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050604
Chromosome:chromosome 11
Location:363466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467577 (1 of 2) PF00319 - SRF-type transcription factor (DNA-binding and dimerisation domain) (SRF-TF) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCCGCCGCCTGCGCCCCACTGAGGCCTGGAGAGGGCGGGGCGGGACG
Internal bar code:ATTACGATGGTCCACGGATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2942
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCTATGTCTGGCCGTAG
Suggested primer 2:TGTCCTGACGAACGCTACAC