Insertion junction: CLIP2.050621_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.050621
Chromosome:chromosome 12
Location:4090142
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g516750 (1 of 55) PTHR23257//PTHR23257:SF394 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCTACCGGGGAGGGCGGCGCCGTCGCGTGGGCGAACGCCCTGGAGGCC
Internal bar code:GAAGATTGGAACTCGTAGGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:387
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTCTCCAGCCGTGTCTTG
Suggested primer 2:TAAGGTCACCAACGTCACGG