Insertion junction: CLIP2.050627_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050627
Chromosome:chromosome 5
Location:2303408
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238250 BLZ2,BZIP1 (1 of 1) K04450 - cyclic AMP-dependent transcription factor ATF-2 (ATF2, CREBP1); Basic leucine zipper1 transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTTCACAAGCATGGCCTGACAGACTCGCGTTCCCCCCACAAACCACC
Internal bar code:GAAGTGGTGTCGCGAGTGCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2064
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGAAGGTGACTGGTGTA
Suggested primer 2:TCTTTGAGTGTGACGCCTCC