Insertion junction: CLIP2.050629_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050629
Chromosome:chromosome 12
Location:8241578
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551600 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACAAACAGACGCACAATGCGGTACACGCACGCACCTGATACATGAGGG
Internal bar code:TTTATTTGTAACGGACTCTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:300
LEAP-Seq percent confirming:29.4118
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTACAGCTTTGGCCCTAA
Suggested primer 2:GTGGTGGTTGGGTGTAGGAG