Insertion junction: CLIP2.050631_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050631
Chromosome:chromosome 13
Location:3851355
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589450 FBB6L1 (1 of 1) IPR002035//IPR013694 - von Willebrand factor, type A // VIT domain; FBB6 like protein 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGAAGAACAGCGCGGCCTGTGGGGAGCAGGAGCGGGAAAGGCAGCCGA
Internal bar code:GGATGTCCGGCAATCCTGGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1765
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGACCTACGTCCTCTCCT
Suggested primer 2:CAGTCGGGAGCTGGAGAATC