Insertion junction: CLIP2.050633_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050633
Chromosome:chromosome 11
Location:4040823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g480700 (1 of 2) IPR000104//IPR000945 - Antifreeze protein, type I // Dopamine beta-hydroxylase-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGGGCTGGTACTTACAACCCCCCAACTAATCATGAATGTACCCCCCC
Internal bar code:CCACATGGCTGTTGTATGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1802
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTAAAAGGGCCCAGCGAT
Suggested primer 2:TCGGGGATGGGGACTATTGT