Insertion junction: CLIP2.050639_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050639
Chromosome:chromosome 7
Location:4919285
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346650 (1 of 1) PTHR11922//PTHR11922:SF34 - GMP SYNTHASE-RELATED // SUBFAMILY NOT NAMED 3'UTR
Cre07.g346672 (1 of 3) IPR000104//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCAATGCGCAGCGTCTCCACGTCCTCATTTACAGCTCGTCGCGCTAC
Internal bar code:TAGCGCTCAGGCGACACAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3541
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATGTCGCGGATACCTAA
Suggested primer 2:GTGAGGTCCAGGTGTGTGAG