Insertion junction: CLIP2.050643_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050643
Chromosome:chromosome 16
Location:7958426
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00188039

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGCAACAAAATTCTGCTGCGGCCTTCCACATACCGTGCCACGCTATGC
Internal bar code:TGTACAGTAAAGTGGGCTAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3685
LEAP-Seq percent confirming:98.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GACATGGGGCCAGTATACGG
Suggested primer 2:GACTCCGTTCGTCTGTGTGT