Insertion junction: CLIP2.050643_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050643
Chromosome:chromosome 16
Location:7958480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00188039

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGGCTGGACGCATGGCGGGCCGTGCCTGTACGAACCGACCCCGGCAAT
Internal bar code:TGTACAGTAAAGTGGGCTAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1632
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GACTCCGTTCGTCTGTGTGT
Suggested primer 2:GACATGGGGCCAGTATACGG