Insertion junction: CLIP2.050646_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050646
Chromosome:chromosome 10
Location:3081590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441300 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGTCTGCCGGCCCGCTACCACCGCCCACTGGCCCTCCGAGGTCCAGCG
Internal bar code:GGCACAAGGATGTCTCGTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3121
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:120
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGGACACCTCGGAAAGC
Suggested primer 2:AGGCAGGTTGCTGAAGTCTC