Insertion junction: CLIP2.050646_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050646
Chromosome:chromosome 10
Location:3081594
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441300 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGGATGCGCCAGGAAGCGCCGGCGCCGGTGTTGTTTTAAATTTGGGGG
Internal bar code:AATCGACTGCTATGTAACCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2667
LEAP-Seq percent confirming:18.6047
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCAGGTTGCTGAAGTCTC
Suggested primer 2:TCATGGACACCTCGGAAAGC