Insertion junction: CLIP2.050652_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.050652
Chromosome:chromosome 17
Location:3071357
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720261 (1 of 1) PTHR12482//PTHR12482:SF5 - UNCHARACTERIZED // PROTEIN C09D4.4, ISOFORM C intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATCAGGACCGTTGACTCTCGCTATCACCCGGCTACTCATGCCATGTC
Internal bar code:GGCTTGGGTGCGCCCCTTTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:241
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCTCCCTCCTCTGAACA
Suggested primer 2:GTTCGTGAACATCGAGCTGC