Insertion junction: CLIP2.050665_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050665
Chromosome:chromosome 2
Location:7262633
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391245 ATG1 (1 of 1) K08269 - serine/threonine-protein kinase ULK/ATG1 (ULK1_2_3, ATG1); Autophagy related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGTGGTGAAGTTGTAGCCAGGCACAGTGGCAGGAGAGCGGGGATGCAG
Internal bar code:GAGAATTTATACGATACAAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1712
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AAGACCGTTGTCGTGACCTC
Suggested primer 2:TTACATGTGGGACGACAGCC