Insertion junction: CLIP2.050665_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050665
Chromosome:chromosome 17
Location:3353985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722950 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGTGACAGCCACCGTGCCACCATGCAAAATGAGGAACGTATCATCCCG
Internal bar code:CAGGACGTATTCCGGGTAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2685
LEAP-Seq percent confirming:46.3415
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCTGATACTCGCGCATCA
Suggested primer 2:CGGCATGTTCAATGAGAGCG