Insertion junction: CLIP2.050670_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050670
Chromosome:chromosome 3
Location:5400724
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g183700 BGS1,GSL3,GTR10 Glucan synthase-like 3; (1 of 4) K00706 - 1,3-beta-glucan synthase (E2.4.1.34) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCGCTATCGGCAGCCCGCACGCGGTGTGGAGCCCAGGCGCAGCGGGGC
Internal bar code:AAACAACTACGCTTGATTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1080
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAAACCGCAGCATTGGTG
Suggested primer 2:CTGATTCGGGTGTTGTGGGA