Insertion junction: CLIP2.050670_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.050670
Chromosome:chromosome 3
Location:5400743
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g183700 BGS1,GSL3,GTR10 Glucan synthase-like 3; (1 of 4) K00706 - 1,3-beta-glucan synthase (E2.4.1.34) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCTCCTCGCCGCTGCTACAGCCACCGTCGGCCCTGCCTGCAGCTGTA
Internal bar code:AAACAACTACGCTTGATTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1428
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTGATTCGGGTGTTGTGGGA
Suggested primer 2:TTGAAACCGCAGCATTGGTG