Insertion junction: CLIP2.050679_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050679
Chromosome:chromosome 16
Location:4920502
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686750 PTA3 (1 of 10) IPR005828//IPR020846 - Major facilitator, sugar transporter-like // Major facilitator superfamily domain; Proton/phosphate symporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCTACTTCGTCTTCGCCGTCGGTAACCTGTCAGCGCTGTGGAAGGTCG
Internal bar code:GTCCTCCAATAGTGGTAATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4157
LEAP-Seq percent confirming:85.4545
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGATTGGCAATCAGGGG
Suggested primer 2:CAGGCTTTCACACAACCTGC