Insertion junction: CLIP2.050695_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050695
Chromosome:chromosome 13
Location:1321937
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g571251 (1 of 8) IPR001163//IPR010920 - LSM domain, eukaryotic/archaea-type // LSM domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGAAAGATTCATGCGTGGCAGCATGCACCCGGTCCTTCATTGCTTAT
Internal bar code:AGAGGCCGATTTAGAGGTCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2803
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCGTCACGATGGCCTAAC
Suggested primer 2:CGCTCCACTGGACAACATCT