Insertion junction: CLIP2.050696_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.050696
Chromosome:chromosome 1
Location:3854354
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025350 FAP235 (1 of 3) PF03703 - Bacterial PH domain (bPH_2); Flagellar Associated Protein 235 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGTTCCCCACTTTCCATCTCACAGGATGTGCAACTTTCGGAGGATTG
Internal bar code:ACTGATTAATTCTAGCGGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1505
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CATTACGCTGTCATGCAGGC
Suggested primer 2:CGCGTTTCACCGACAAACTT