Insertion junction: CLIP2.050705_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050705
Chromosome:chromosome 7
Location:4647603
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344634 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCACGCAGTAGCTGAGGTCCAGGTGCTGTAGCTGGGGCAGGCCGGAG
Internal bar code:GTTCTTGACCGCCCGCGGCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2884
LEAP-Seq percent confirming:56.8182
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCAAGTTTAGCGATGCGG
Suggested primer 2:CTTCTGGGGTTGCAGGAGAG