Insertion junction: CLIP2.050708_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050708
Chromosome:chromosome 2
Location:7745901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g146650 TTL3,SSA11 (1 of 2) K16582 - tubulin polyglutamylase TTLL6/13 [EC:6.-.-.-] (TTLL6_13); Tubulin tyrosine ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTACCAGCTTGCGGCGTGACGCGGTCACACACACGGCGCCGCGCACCG
Internal bar code:AGCACTATTGACTCATTTTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1790
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CATTCACGCCATAAGCTGCC
Suggested primer 2:AACACTCGTGGAGCACTGAG