Insertion junction: CLIP2.050713_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050713
Chromosome:chromosome 1
Location:6345322
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044900 (1 of 5) PTHR10351:SF42 - LD40663P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCGAATCGTCCCTATCGTATAGTGGTTAGTACATCACGTTGTGGCCG
Internal bar code:CGCCTCCTACGTGTGGTTTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1431
LEAP-Seq percent confirming:68.0851
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTTGCACGTGTCCATTG
Suggested primer 2:GGTCAGTGCGTGAAGTGAGA