Insertion junction: CLIP2.050714_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050714
Chromosome:chromosome 7
Location:1778860
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800785 (1 of 5) PTHR30405 - TRANSPOSASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACCCACTCACCTTCACCCACTCACTCACTTACTTCGCAATTCAGGTCA
Internal bar code:GAAATAGTAGCGGCAGCCACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1866
LEAP-Seq percent confirming:21.9512
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CCACTTACCCACACAGTCCC
Suggested primer 2:CTCATTTTGCTACCGCGACG