Insertion junction: CLIP2.050721_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050721
Chromosome:chromosome 14
Location:1492934
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g617650 PDE1 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGAGCCCAAGGGCAAGGGTTTGGGAGGGAAGGAAAAGGCCGACTAGC
Internal bar code:CTTATACTAGTCAGAACTTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2929
LEAP-Seq percent confirming:96.7213
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAGAGGCTGACGTGGAAC
Suggested primer 2:TGCGAGAGAAACTTCCCACC