Insertion junction: CLIP2.050727_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.050727
Chromosome:chromosome 8
Location:764573
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g800895 (1 of 11) IPR000626//IPR029071 - Ubiquitin domain // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCGCCTGCACCTGCGCCTGTGCCTGTGCCTGCACCTGCGCGTGTTTT
Internal bar code:ATATGTAACATCCACTTGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2656
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCAAACTACAAACCGCA
Suggested primer 2:ATACCAGCCCAAACTGACCG