Insertion junction: CLIP2.050733_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.050733
Chromosome:chromosome 11
Location:312264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467567 UBQ1 Ubiquitin; (1 of 1) PTHR10666:SF150 - POLYUBIQUITIN 3 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATGCCACCG
Internal bar code:AGAGTACGTCTGTTAGCGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2028
LEAP-Seq percent confirming:69.8113
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGACAGAAACGGCTACCC
Suggested primer 2:CTGGATCTTGGCCTTCACGT