Insertion junction: CLIP2.050736_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.050736
Chromosome:chromosome 6
Location:2058009
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265850 TCP2,CTPA2,TSP2,CTPC1 C-terminal peptidase C; (1 of 1) PTHR32060//PTHR32060:SF8 - FAMILY NOT NAMED // PEPTIDASE S41 FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGTCGTACACGCGCTGACCAATCCCTGTGCTGCGCGCTTGCACAGGT
Internal bar code:CGCCGCGTTTAAGGCACAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:589
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTCAGCAAGCAGAGACA
Suggested primer 2:GCTTTGCTGCATCGCATACA