Insertion junction: CLIP2.050738_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050738
Chromosome:chromosome 5
Location:3451389
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g233303 (1 of 1) K11718 - UDP-glucose:glycoprotein glucosyltransferase (HUGT) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAAACACCCCTGGCCCATCCCGAGCCTGCTGTACCACTGCGCCTGTCC
Internal bar code:GCCTACGCTTGGGGACCCTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:427
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTCGTTTTCGTTGGTTT
Suggested primer 2:ACCGCTTTTCCAACCATCCT