Insertion junction: CLIP2.050739_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050739
Chromosome:chromosome 6
Location:3901632
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278190 (1 of 5) PTHR10351:SF42 - LD40663P CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCAGCAGCAGCGGGTGGCATGGGCAGGAACTGGGCTGGGCTGCGTTCC
Internal bar code:GCATCACTTTGACTGTACCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1726
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAACGTCTACCCATTGCT
Suggested primer 2:GTGGATGGCCTCTGCTACTG