Insertion junction: CLIP2.050739_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.050739
Chromosome:chromosome 6
Location:3901682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278190 (1 of 5) PTHR10351:SF42 - LD40663P CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCCCCCTCCATGCCGCCGACTGGCGGCTTCGAGGCTGCGGCCACACA
Internal bar code:GGGGCCAGCGTTCAGTCCTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:379
LEAP-Seq percent confirming:56.25
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGATGGCCTCTGCTACTG
Suggested primer 2:CCCAACGTCTACCCATTGCT