Insertion junction: CLIP2.050742_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.050742
Chromosome:chromosome 6
Location:7743992
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g302900 (1 of 1) PTHR23180//PTHR23180:SF203 - CENTAURIN/ARF // CENTAURIN BETA 1A intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCAACATCATCCTCAGCCCTTCGCCCACTTTTACTTGCTGCTTGGGCT
Internal bar code:TATATATGTCAACTCTTCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2322
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGTCAGCAACAACTCTCT
Suggested primer 2:GAAGCCCGAGAACAAGGTGA