Insertion junction: CLIP2.050745_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.050745
Chromosome:chromosome 12
Location:3156095
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500450 TPD1 (1 of 2) PTHR12121:SF37 - 2',5'-PHOSPHODIESTERASE 12; 2'%252C5'-phosphodiesterase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTTGTGGCACACCTCGCTGGCCACCCTCAGCCGACTCCTGCCGCACGC
Internal bar code:AGATTAAGGGTACGCGTAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1240
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCAGCTACCAGTACACA
Suggested primer 2:GCTGTAGAACACGTCCACCA