Insertion junction: CLIP2.050753_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.050753
Chromosome:chromosome 12
Location:2556901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g506850 (1 of 2) PTHR10183//PTHR10183:SF323 - CALPAIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGACGTCAGTAGCTAGCCACGCCCACTGCCGTCCCGGCCGCCGGCACCC
Internal bar code:AAAACTGGGGTATCACGTACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:224
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGAACGACTCCTGTGTGA
Suggested primer 2:ACAACCAGCATAAGCACCGA