Insertion junction: CLIP2.050755_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.050755
Chromosome:chromosome 4
Location:2975790
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g800480 (1 of 352) PF00078 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCAGTTCGCCGCGTCGCAGCTGCTTAGCTGACTCGTGCGCAGGTCACC
Internal bar code:TTAATATTTGGACGAATACTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:6026
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGCAACGTGGCTTTGTA
Suggested primer 2:AACAAGTGCTGGATCTGCGA